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• Transcriptional regulation of the astrocytic excitatory amino acid transporter 1 (EAAT1) via NF-κB and Yin Yang 1 (YY1)

  Karki, P., Kim, C., Smith, K., Son, D. S., Aschner, M. & Lee, E., Sep 25 2015, In: Journal of Biological Chemistry. 290, 39, p. 23725-23737 13 p.

  Research output: Contribution to journal › Article › peer-review
  47 Scopus citations

• Transcriptional regulation of the human GLUT4 gene promoter in diabetic transgenic mice

  Olson, A. L. & Pessin, J. E., 1995, In: Journal of Biological Chemistry. 270, 40, p. 23491-23495 5 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  59 Scopus citations

• Transcriptional regulation of the human tumor suppressor p14 ^ARF by E2F1, E2F2, E2F3, and Sp1-like factors

  Parisi, T., Pollice, A., Cristofano, A. D., Calabrò, V. & Mantia, G. L., 2002, In: Biochemical and Biophysical Research Communications. 291, 5, p. 1138-1145 8 p.

  Research output: Contribution to journal › Article › peer-review
  46 Scopus citations

• Transcriptional regulation of the mouse αA-crystallin gene: Binding of USF to the -7/+5 region

  Sax, C. M., Cvekl, A. & Piatigorsky, J., Feb 7 1997, In: Gene. 185, 2, p. 209-216 8 p.

  Research output: Contribution to journal › Article › peer-review
  14 Scopus citations

• Transcriptional regulation of the mouse αA-crystallin gene: Activation dependent on a cyclic AMP-responsive element (DE1/CRE) and a Pax-6-binding site

  Cvekl, A., Kashanchi, F., Sax, C. M., Brady, J. N. & Piatigorsky, J., Feb 1995, In: Molecular and cellular biology. 15, 2, p. 653-660 8 p.

  Research output: Contribution to journal › Article › peer-review
  106 Scopus citations

• Transcriptional regulator Leu3 of Saccharomyces cerevisiae: Separation of activator and repressor functions

  Sze, J. Y., Remboutsika, E. & Kohlhaw, G. B., Sep 1993, In: Molecular and cellular biology. 13, 9, p. 5702-5709 8 p.

  Research output: Contribution to journal › Article › peer-review
  26 Scopus citations

• Transcriptional regulators CITED2 and PU.1 cooperate in maintaining hematopoietic stem cells

  Mattes, K., Geugien, M., Korthuis, P. M., Brouwers-Vos, A. Z., Fehrmann, R. S. N., Todorova, T. I., Steidl, U., Vellenga, E. & Schepers, H., May 2019, In: Experimental Hematology. 73, p. 38-49.e7

  Research output: Contribution to journal › Article › peer-review

  Open Access
  2 Scopus citations

• Transcriptional repression of Stat6-dependent interleukin-4-induced genes by BCL-6: Specific regulation of Iε transcription and immunoglobulin E switching

  Harris, M. B., Chang, C. C., Berton, M. T., Danial, N. N., Zhang, J., Kuehner, D., Ye, B. H., Kvatyuk, M., Pandolfi, P. P., Cattoretti, G., Dalla-Favera, R. & Rothman, P. B., Oct 1999, In: Molecular and cellular biology. 19, 10, p. 7264-7275 12 p.

  Research output: Contribution to journal › Article › peer-review
  167 Scopus citations

• Transcriptional signature with differential expression of BCL6 target genes accurately identifies BCL6-dependent diffuse large B cell lymphomas

  Polo, J. M., Juszczynski, P., Monti, S., Cerchietti, L., Ye, K., Greally, J. M., Shipp, M. & Melnick, A., Feb 27 2007, In: Proceedings of the National Academy of Sciences of the United States of America. 104, 9, p. 3207-3212 6 p.

  Research output: Contribution to journal › Article › peer-review
  112 Scopus citations

• Transcriptional States and Chromatin Accessibility Underlying Human Erythropoiesis

  Ludwig, L. S., Lareau, C. A., Bao, E. L., Nandakumar, S. K., Muus, C., Ulirsch, J. C., Chowdhary, K., Buenrostro, J. D., Mohandas, N., An, X., Aryee, M. J., Regev, A. & Sankaran, V. G., Jun 11 2019, In: Cell Reports. 27, 11, p. 3228-3240.e7

  Research output: Contribution to journal › Article › peer-review

  Open Access
  70 Scopus citations

• Transcriptional targeting of adenoviral vector through the CXCR4 tumor-specific promoter

  Zhu, Z. B., Makhija, S. K., Lu, B., Wang, M., Kaliberova, L., Liu, B., Rivera, A. A., Nettelbeck, D. M., Mahasreshti, P. J., Leath, C. A., Yamaoto, M., Alvarez, R. D. & Curiel, D. T., Apr 2004, In: Gene Therapy. 11, 7, p. 645-648 4 p.

  Research output: Contribution to journal › Article › peer-review
  53 Scopus citations

• Transcriptional targeting of tumors with a novel tumor-specific survivin promoter

  Zhu, Z. B., Makhija, S. K., Lu, B., Wang, M., Kaliberova, L., Liu, B., Rivera, A. A., Nettelbeck, D. M., Mahasreshti, P. J., Leath, C. A., Barker, S., Yamaoto, M., Li, F., Alvarez, R. D. & Curiel, D. T., Apr 2004, In: Cancer gene therapy. 11, 4, p. 256-262 7 p.

  Research output: Contribution to journal › Article › peer-review
  84 Scopus citations

• Transcription cooperation by NFAT·C/EBP composite enhancer complex

  Yang, T. T. C. & Chow, C. W., May 2 2003, In: Journal of Biological Chemistry. 278, 18, p. 15874-15885 12 p.

  Research output: Contribution to journal › Article › peer-review
  50 Scopus citations

• Transcription elongation regulator 1 is a co-integrator of the cell fate determination factor Dachshund homolog

  Zhou, J., Liu, Y., Zhang, W., Popov, V. M., Wang, M., Pattabiraman, N., Suñé, C., Cvekl, A., Wu, K., Jiang, J., Wang, C. & Pestell, R. G., Dec 17 2010, In: Journal of Biological Chemistry. 285, 51, p. 40342-40350 9 p.

  Research output: Contribution to journal › Article › peer-review
  22 Scopus citations

• Transcription factor AP-2 is expressed in neural crest cell lineages during mouse embryogenesis

  Mitchell, P. J., Timmons, P. M., Hébert, J. M., Rigby, P. W. J. & Tjian, R., 1991, In: Genes and Development. 5, 1, p. 105-119 15 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  495 Scopus citations

• Transcription factor binding site identification in yeast: A comparison of high-density oligonucleotide and PCR-based microarray platforms

  Borneman, A. R., Zhang, Z. D., Rozowsky, J., Seringhaus, M. R., Gerstein, M. & Snyder, M., Oct 2007, In: Functional and Integrative Genomics. 7, 4, p. 335-345 11 p.

  Research output: Contribution to journal › Article › peer-review
  21 Scopus citations

• Transcription factor binding site identification using the self-organizing map

  Mahony, S., Hendrix, D., Golden, A., Smith, T. J. & Rokhsar, D. S., May 1 2005, In: Bioinformatics. 21, 9, p. 1807-1814 8 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  60 Scopus citations

• Transcription factor cooperativity in early adipogenic hotspots and super-enhancers

  Siersbæk, R., Rabiee, A., Nielsen, R., Sidoli, S., Traynor, S., Loft, A., Poulsen, L. L. C., Rogowska-Wrzesinska, A., Jensen, O. N. & Mandrup, S., Jun 12 2014, In: Cell Reports. 7, 5, p. 1443-1455 13 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  168 Scopus citations

• Transcription factor EB: A central regulator of both the autophagosome and lysosome

  Zhao, E. & Czaja, M. J., May 2012, In: Hepatology. 55, 5, p. 1632-1634 3 p.

  Research output: Contribution to journal › Comment/debate › peer-review
  24 Scopus citations

• Transcription Factor EB Controls Metabolic Flexibility during Exercise

  Mansueto, G., Armani, A., Viscomi, C., D'Orsi, L., De Cegli, R., Polishchuk, E. V., Lamperti, C., Di Meo, I., Romanello, V., Marchet, S., Saha, P. K., Zong, H., Blaauw, B., Solagna, F., Tezze, C., Grumati, P., Bonaldo, P., Pessin, J. E., Zeviani, M., Sandri, M., & 1 othersBallabio, A., Jan 10 2017, In: Cell metabolism. 25, 1, p. 182-196 15 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  180 Scopus citations

• Transcription factor GATA4 inhibits doxorubicin-induced autophagy and cardiomyocyte death

  Kobayashi, S., Volden, P., Timm, D., Mao, K., Xu, X. & Liang, Q., Jan 1 2010, In: Journal of Biological Chemistry. 285, 1, p. 793-804 12 p.

  Research output: Contribution to journal › Article › peer-review
  197 Scopus citations

• Transcription factor JunD, deprived of menin, switches from growth suppressor to growth promoter

  Agarwal, S. K., Novotny, E. A., Crabtree, J. S., Weitzman, J. B., Yaniv, M., Burns, A. L., Chandrasekharappa, S. C., Collins, F. S., Spiegel, A. M. & Marx, S. J., Sep 16 2003, In: Proceedings of the National Academy of Sciences of the United States of America. 100, 19, p. 10770-10775 6 p.

  Research output: Contribution to journal › Article › peer-review
  102 Scopus citations

• Transcription factor MEF2D is required for the maintenance of MLL-rearranged acute myeloid leukemia

  Zhao, L., Zhang, P., Galbo, P. M., Zhou, X., Aryal, S., Qiu, S., Zhang, H., Zhou, Y., Li, C., Zheng, D., Bhatia, R. & Lu, R., Nov 23 2021, In: Blood Advances. 5, 22, p. 4727-4740 14 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  4 Scopus citations

• Transcription factor NFE2L2/NRF2 modulates chaperone-mediated autophagy through the regulation of LAMP2A

  Pajares, M., Rojo, A. I., Arias, E., Díaz-Carretero, A., Cuervo, A. M. & Cuadrado, A., Aug 3 2018, In: Autophagy. 14, 8, p. 1310-1322 13 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  97 Scopus citations

• Transcription factors and hypopituitarism

  Cohen, L. E., Radovick, S. & Wondisford, F. E., 1999, In: Trends in Endocrinology and Metabolism. 10, 8, p. 326-332 7 p.

  Research output: Contribution to journal › Review article › peer-review
  12 Scopus citations

• Transcription factors in the development of medial hypothalamic structures

  Jo, Y. H. & Chua, S., Sep 2009, In: American Journal of Physiology - Endocrinology and Metabolism. 297, 3, p. E563-E567

  Research output: Contribution to journal › Review article › peer-review
  17 Scopus citations

• Transcription goes digital

  Lionnet, T. & Singer, R. H., Apr 2012, In: EMBO Reports. 13, 4, p. 313-321 9 p.

  Research output: Contribution to journal › Review article › peer-review
  60 Scopus citations

• Transcription initiation by human RNA polymerase II visualized at single-molecule resolution

  Revyakin, A., Zhang, Z., Coleman, R. A., Li, Y., Inouye, C., Lucas, J. K., Park, S. R., Chu, S. & Tjian, R., Aug 1 2012, In: Genes and Development. 26, 15, p. 1691-1702 12 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  65 Scopus citations

• Transcription map of Xq27: Candidates for several X-linked diseases

  Zucchi, I., Jones, J., Affer, M., Montagna, C., Redolfi, E., Susani, L., Vezzoni, P., Parvari, R., Schlessinger, D., Whyte, M. P. & Mumm, S., Apr 15 1999, In: Genomics. 57, 2, p. 209-218 10 p.

  Research output: Contribution to journal › Article › peer-review
  14 Scopus citations

• Transcription of adenovirus RNA in permissive and nonpermissive infections

  Farber, M. S. & Baum, S. G., 1978, In: Journal of virology. 27, 1, p. 136-148 13 p.

  Research output: Contribution to journal › Article › peer-review
  13 Scopus citations

• Transcription of functionally related constitutive genes is not coordinated

  Gandhi, S. J., Zenklusen, D., Lionnet, T. & Singer, R. H., Jan 2011, In: Nature Structural and Molecular Biology. 18, 1, p. 27-35 9 p.

  Research output: Contribution to journal › Article › peer-review
  87 Scopus citations

• Transcription of G-Protein Coupled Receptors in Corporeal Smooth Muscle is Regulated by the Endogenous Neutral Endopeptidase Inhibitor Sialorphin

  Tong, Y., Tiplitsky, S. I., Tar, M., Melman, A. & Davies, K. P., Aug 2008, In: Journal of Urology. 180, 2, p. 760-766 7 p.

  Research output: Contribution to journal › Article › peer-review
  16 Scopus citations

• Transcription of human papillomavirus type 16 early genes in a cervical cancer and a cancer-derived cell line and identification of the E7 protein

  Smotkin, D. & Wettstein, F. O., 1986, In: Proceedings of the National Academy of Sciences of the United States of America. 83, 13, p. 4680-4684 5 p.

  Research output: Contribution to journal › Article › peer-review
  507 Scopus citations

• Transcription of native and denatured DNA preparations by bacteriophage T3 induced RNA polymerase.

  Maitra, U., Chakraborty, P. R., Salvo, R. A., Huang, H. H., Bandyopadhyay, P. & Sarkar, P., 1974, In: Basic life sciences. 3, p. 125-144 20 p.

  Research output: Contribution to journal › Article › peer-review

• Transcription of the KpnI families of long interspersed DNAs in human cells

  Shafit-Zagardo, B., Brown, F. L., Zavodny, P. J. & Maio, J. J., 1983, In: Nature. 304, 5923, p. 277-280 4 p.

  Research output: Contribution to journal › Article › peer-review
  57 Scopus citations

• Transcription of the segment-polarity gene wingless in the imaginal discs of Drosophila, and the phenotype of a pupal-lethal wg mutation

  Baker, N. E., 1988, In: Development. 102, 3, p. 489-497 9 p.

  Research output: Contribution to journal › Article › peer-review
  157 Scopus citations

• Transcription termination in the Escherichia coli dnaA gene is not mediated by the internal DnaA box

  Perez-Roger, I., Macian, F. & Armengod, M. E., 1995, In: Journal of Bacteriology. 177, 7, p. 1896-1899 4 p.

  Research output: Contribution to journal › Article › peer-review
  5 Scopus citations

• Transcriptome, proteome, and metabolome in dyssynchronous heart failure and CRT

  Barth, A. S., Chakir, K., Kass, D. A. & Tomaselli, G. F., Apr 2012, In: Journal of Cardiovascular Translational Research. 5, 2, p. 180-187 8 p.

  Research output: Contribution to journal › Review article › peer-review
  14 Scopus citations

• Transcriptome analysis of human diabetic kidney disease

  Woroniecka, K. I., Park, A. S. D., Mohtat, D., Thomas, D. B., Pullman, J. M. & Susztak, K., Sep 2011, In: Diabetes. 60, 9, p. 2354-2369 16 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  357 Scopus citations

• Transcriptome analysis of microglia in a mouse model of Rett syndrome: differential expression of genes associated with microglia/macrophage activation and cellular stress

  Zhao, D., Mokhtari, R., Pedrosa, E., Birnbaum, R., Zheng, D. & Lachman, H. M., Mar 29 2017, In: Molecular Autism. 8, 1, 17.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  34 Scopus citations

• Transcriptome analysis of mycobacteria-specific CD4⁺ T cells identified by activation-induced expression of CD154

  Kunnath-Velayudhan, S., Goldberg, M. F., Saini, N. K., Johndrow, C. T., Ng, T. W., Johnson, A. J., Xu, J., Chan, J., Jacobs, W. R. & Porcelli, S. A., Oct 1 2017, In: Journal of Immunology. 199, 7, p. 2596-2606 11 p.

  Research output: Contribution to journal › Article › peer-review
  6 Scopus citations

• Transcriptome analysis of neural progenitor cells derived from Lowe syndrome induced pluripotent stem cells: Identification of candidate genes for the neurodevelopmental and eye manifestations

  Liu, H., Barnes, J., Pedrosa, E., Herman, N. S., Salas, F., Wang, P., Zheng, D. & Lachman, H. M., May 11 2020, In: Journal of Neurodevelopmental Disorders. 12, 1, 14.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  10 Scopus citations

• Transcriptome Comparison of Human Neurons Generated Using Induced Pluripotent Stem Cells Derived from Dental Pulp and Skin Fibroblasts

  Chen, J., Lin, M., Foxe, J. J., Pedrosa, E., Hrabovsky, A., Carroll, R., Zheng, D. & Lachman, H. M., Oct 3 2013, In: PloS one. 8, 10, e75682.

  Research output: Contribution to journal › Article › peer-review
  37 Scopus citations

• Transcriptome profile of the murine macrophage cell response to Candida parapsilosis

  Németh, T., Tóth, A., Hamari, Z., Falus, A., Éder, K., Vágvölgyi, C., Guimaraes, A. J., Nosanchuk, J. D. & Gácser, A., Apr 2014, In: Fungal Genetics and Biology. 65, p. 48-56 9 p.

  Research output: Contribution to journal › Article › peer-review
  12 Scopus citations

• Transcriptome profiling of hippocampal CA1 after early-life seizure-induced preconditioning may elucidate new genetic therapies for epilepsy

  Friedman, L. K., Mancuso, J., Patel, A., Kudur, V., Leheste, J. R., Iacobas, S., Botta, J., Iacobas, D. A. & Spray, D. C., Jul 2013, In: European Journal of Neuroscience. 38, 1, p. 2139-2152 14 p.

  Research output: Contribution to journal › Article › peer-review
  22 Scopus citations

• Transcriptome signature of immune cells post reovirus treatment in kras mutated colorectal cancer

  Fogel, E. J., Samouha, A., Goel, S. & Maitra, R., 2021, In: Cancer Management and Research. 13, p. 6743-6754 12 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Transcriptome-wide association study of blood cell traits in african ancestry and hispanic/latino populations

  Wen, J., Xie, M., Rowland, B., Rosen, J. D., Sun, Q., Chen, J., Tapia, A. L., Qian, H., Kowalski, M. H., Shan, Y., Young, K. L., Graff, M., Argos, M., Avery, C. L., Bien, S. A., Buyske, S., Yin, J., Choquet, H., Fornage, M., Hodonsky, C. J., & 16 othersJorgenson, E., Kooperberg, C., Loos, R. J. F., Liu, Y., Moon, J. Y., North, K. E., Rich, S. S., Rotter, J. I., Smith, J. A., Zhao, W., Shang, L., Wang, T., Zhou, X., Reiner, A. P., Raffield, L. M. & Li, Y., Jul 2021, In: Genes. 12, 7, 1049.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  2 Scopus citations

• Transcriptomic alterations in Trypanosoma cruzi-infected cardiac myocytes

  Goldenberg, R. C. D. S., Iacobas, D. A., Iacobas, S., Rocha, L. L., da Silva de Azevedo Fortes, F., Vairo, L., Nagajyothi, F., Campos de Carvalho, A. C., Tanowitz, H. B. & Spray, D. C., Dec 2009, In: Microbes and Infection. 11, 14-15, p. 1140-1149 10 p.

  Research output: Contribution to journal › Article › peer-review
  31 Scopus citations

• Transcriptomic analysis and novel insights into lens fibre cell differentiation regulated by Gata3

  Martynova, E., Zhao, Y., Xie, Q., Zheng, D. & Cvekl, A., Dec 1 2019, In: Open Biology. 9, 12, 190220.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  9 Scopus citations

• Transcriptomic analysis identifies differences in gene expression in actinic keratoses after treatment with imiquimod and between responders and non responders

  Trager, M. H., Rizk, E., Rose, S., Zhu, K., Lau, B., Fullerton, B. T., Pradhan, J., Moore, M., Srivastava, A. C., Singer, G., Gartrell, R., Chang, R., Geskin, L. J., Saenger, Y. M. & Goldenberg, G., Dec 2021, In: Scientific reports. 11, 1, 8775.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  1 Scopus citations