Understanding the role of Arg96 in structure and stability of green fluorescent protein

Olesya V. Stepanenko, Vladislav Verkhusha, Michail M. Shavlovsky, Irina M. Kuznetsova, Vladimir N. Uversky, Konstantin K. Turoverov

Research output: Contribution to journalArticle

10 Citations (Scopus)

Abstract

Arg96 is a highly conservative residue known to catalyze spontaneous green fluorescent protein (GFP) chromophore biosynthesis. To understand a role of Arg96 in conformational stability and structural behavior of EGFP, the properties of a series of the EGFP mutants bearing substitutions at this position were studied using circular dichroism, steady state fluorescence spectroscopy, fluorescence lifetime, kinetics and equilibrium unfolding analysis, and acrylamide-induced fluorescence quenching. During the protein production and purification, high yield was achieved for EGFP/Arg96Cys variant, whereas EGFP/Arg96Ser and EGFP/Arg96Ala were characterized by essentially lower yields and no protein was produced when Arg96 was substituted by Gly. We have also shown that only EGFP/Arg96Cys possessed relatively fast chromophore maturation, whereas it took EGFP/Arg96Ser and EGFP/Arg96Ala about a year to develop a noticeable green fluorescence. The intensity of the characteristic green fluorescence measured for the EGFP/Arg96Cys and EGFP/Arg96Ser (or EGFP/Arg96Ala) was 5- and 50-times lower than that of the nonmodified EGFP. Intriguingly, EGFP/Arg96Cys was shown to be more stable than EGFP toward the GdmCl-induced unfolding both in kinetics and in the quasi-equilibrium experiments. In comparison with EGFP, tryptophan residues of EGFP/Arg96Cys were more accessible to the solvent. These data taken together suggest that besides established earlier crucial catalytic role, Arg96 is important for the overall folding and conformational stability of GFP.

Original languageEnglish (US)
Pages (from-to)539-551
Number of pages13
JournalProteins: Structure, Function and Genetics
Volume73
Issue number3
DOIs
StatePublished - Nov 15 2008

Fingerprint

Green Fluorescent Proteins
Fluorescence
Chromophores
Bearings (structural)
Kinetics
Acrylamide
Fluorescence Spectrometry
Biosynthesis
Fluorescence spectroscopy
Protein Biosynthesis
Circular Dichroism
Tryptophan
Purification
Quenching
Proteins
Substitution reactions
Experiments

Keywords

  • Chromophore structure
  • Circular dichroism
  • Conformational stability
  • Enhanced green fluorescent protein
  • Fluorescent protein
  • Green fluorescent protein
  • Point mutation

ASJC Scopus subject areas

  • Genetics
  • Structural Biology
  • Biochemistry

Cite this

Stepanenko, O. V., Verkhusha, V., Shavlovsky, M. M., Kuznetsova, I. M., Uversky, V. N., & Turoverov, K. K. (2008). Understanding the role of Arg96 in structure and stability of green fluorescent protein. Proteins: Structure, Function and Genetics, 73(3), 539-551. https://doi.org/10.1002/prot.22089

Understanding the role of Arg96 in structure and stability of green fluorescent protein. / Stepanenko, Olesya V.; Verkhusha, Vladislav; Shavlovsky, Michail M.; Kuznetsova, Irina M.; Uversky, Vladimir N.; Turoverov, Konstantin K.

In: Proteins: Structure, Function and Genetics, Vol. 73, No. 3, 15.11.2008, p. 539-551.

Research output: Contribution to journalArticle

Stepanenko, Olesya V. ; Verkhusha, Vladislav ; Shavlovsky, Michail M. ; Kuznetsova, Irina M. ; Uversky, Vladimir N. ; Turoverov, Konstantin K. / Understanding the role of Arg96 in structure and stability of green fluorescent protein. In: Proteins: Structure, Function and Genetics. 2008 ; Vol. 73, No. 3. pp. 539-551.
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