EVA

Continuous automatic evaluation of protein structure prediction servers

Volker A. Eyrich, Marc A. Martí-Renom, Dariusz Przybylski, Mallur S. Madhusudhan, Andras Fiser, Florencio Pazos, Alfonso Valencia, Andrej Sali, Burkhard Rost

Research output: Contribution to journalArticle

160 Citations (Scopus)

Abstract

Evaluation of protein structure prediction methods is difficult and time-consuming. Here, we describe EVA, a web server for assessing protein structure prediction methods, in an automated, continuous and large-scale fashion. Currently, EVA evaluates the performance of a variety of prediction methods available through the internet. Every week, the sequences of the latest experimentally determined protein structures are sent to prediction servers, results are collected, performance is evaluated, and a summary is published on the web. EVA has so far collected data for more than 3000 protein chains. These results may provide valuable insight to both developers and users of prediction methods.

Original languageEnglish (US)
Pages (from-to)1242-1243
Number of pages2
JournalBioinformatics
Volume17
Issue number12
StatePublished - 2002
Externally publishedYes

Fingerprint

Extravehicular Activity
Protein Structure Prediction
Servers
Server
Proteins
Evaluation
Prediction
Web Server
Protein Structure
Internet
Protein
Evaluate

ASJC Scopus subject areas

  • Clinical Biochemistry
  • Computer Science Applications
  • Computational Theory and Mathematics

Cite this

Eyrich, V. A., Martí-Renom, M. A., Przybylski, D., Madhusudhan, M. S., Fiser, A., Pazos, F., ... Rost, B. (2002). EVA: Continuous automatic evaluation of protein structure prediction servers. Bioinformatics, 17(12), 1242-1243.

EVA : Continuous automatic evaluation of protein structure prediction servers. / Eyrich, Volker A.; Martí-Renom, Marc A.; Przybylski, Dariusz; Madhusudhan, Mallur S.; Fiser, Andras; Pazos, Florencio; Valencia, Alfonso; Sali, Andrej; Rost, Burkhard.

In: Bioinformatics, Vol. 17, No. 12, 2002, p. 1242-1243.

Research output: Contribution to journalArticle

Eyrich, VA, Martí-Renom, MA, Przybylski, D, Madhusudhan, MS, Fiser, A, Pazos, F, Valencia, A, Sali, A & Rost, B 2002, 'EVA: Continuous automatic evaluation of protein structure prediction servers', Bioinformatics, vol. 17, no. 12, pp. 1242-1243.
Eyrich VA, Martí-Renom MA, Przybylski D, Madhusudhan MS, Fiser A, Pazos F et al. EVA: Continuous automatic evaluation of protein structure prediction servers. Bioinformatics. 2002;17(12):1242-1243.
Eyrich, Volker A. ; Martí-Renom, Marc A. ; Przybylski, Dariusz ; Madhusudhan, Mallur S. ; Fiser, Andras ; Pazos, Florencio ; Valencia, Alfonso ; Sali, Andrej ; Rost, Burkhard. / EVA : Continuous automatic evaluation of protein structure prediction servers. In: Bioinformatics. 2002 ; Vol. 17, No. 12. pp. 1242-1243.
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