Assessing the Tendency of Fluorescent Proteins to Oligomerize Under Physiologic Conditions

Lindsey M. Costantini, Matteo Fossati, Maura Francolini, Erik Lee Snapp

Research output: Contribution to journalArticle

86 Citations (Scopus)

Abstract

Several fluorescent proteins (FPs) are prone to forming low-affinity oligomers. This undesirable tendency is exacerbated when FPs are confined to membranes or when fused to naturally oligomeric proteins. Oligomerization of FPs limits their suitability for creating fusions with proteins of interest. Unfortunately, no standardized method evaluates the biologically relevant oligomeric state of FPs. Here, we describe a quantitative visual assay for assessing whether FPs are sufficiently monomeric under physiologic conditions. Membrane-associated FP-fusion proteins, by virtue of their constrained planar geometry, achieve high effective concentrations. We exploited this propensity to develop an assay to measure FP tendencies to oligomerize in cells. FPs were fused on the cytoplasmic end of an endoplasmic reticulum (ER) signal-anchor membrane protein (CytERM) and expressed in cells. Cells were scored based on the ability of CytERM to homo-oligomerize with proteins on apposing membranes and restructure the ER from a tubular network into organized smooth ER (OSER) whorl structures. The ratio of nuclear envelope and OSER structures mean fluorescent intensities for cells expressing enhanced green fluorescent protein (EGFP) or monomeric green fluorescent protein (mGFP) CytERM established standards for comparison of uncharacterized FPs. We tested three FPs and identified two as sufficiently monomeric, while a third previously reported as monomeric was found to strongly oligomerize.

Original languageEnglish (US)
Pages (from-to)643-649
Number of pages7
JournalTraffic
Volume13
Issue number5
DOIs
StatePublished - May 2012

Fingerprint

Proteins
Endoplasmic Reticulum
Membranes
Membrane Proteins
Assays
Fusion reactions
Smooth Endoplasmic Reticulum
Oligomerization
Nuclear Envelope
Green Fluorescent Proteins
Anchors
Oligomers
Cells
Geometry

Keywords

  • Dimer
  • Endoplasmic reticulum
  • fluorescence
  • GFP
  • Membrane
  • Monomer

ASJC Scopus subject areas

  • Biochemistry
  • Cell Biology
  • Structural Biology
  • Molecular Biology
  • Genetics

Cite this

Assessing the Tendency of Fluorescent Proteins to Oligomerize Under Physiologic Conditions. / Costantini, Lindsey M.; Fossati, Matteo; Francolini, Maura; Snapp, Erik Lee.

In: Traffic, Vol. 13, No. 5, 05.2012, p. 643-649.

Research output: Contribution to journalArticle

Costantini, Lindsey M. ; Fossati, Matteo ; Francolini, Maura ; Snapp, Erik Lee. / Assessing the Tendency of Fluorescent Proteins to Oligomerize Under Physiologic Conditions. In: Traffic. 2012 ; Vol. 13, No. 5. pp. 643-649.
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