A novel U2 and U11/U12 snRNP protein that associates with the pre-mRNA branch site

Cindy L. Will, Claudia Schneider, Andrew M. Macmillan, Nikos F. Katopodis, Gitte Neubauer, Matthias Wilm, Reinhard Lührmann, Charles C. Query

Research output: Contribution to journalArticle

108 Citations (Scopus)

Abstract

Previous UV cross-linking studies demonstrated that, upon integration of the U2 snRNP into the spliceosome, a 14 kDa protein (p14) interacts directly with the branch adenosine, the nucleophile for the first transesterification step of splicing. We have identified the cDNA encoding this protein by microsequencing a 14 kDa protein isolated from U2-type spliceosomes. This protein contains an RNA recognition motif and is highly conserved across species. Antibodies raised against this cDNA-encoded protein precipitated the 14 kDa protein cross-linked to the branch adenosine, confirming the identity of the p14 cDNA. A combination of immunoblotting, protein microsequencing and immunoprecipitation revealed that p14 is a component of both 17S U2 and 18S U11/U12 snRNPs, suggesting that it contributes to the interaction of these snRNPs with the branch sites of U2-and U12-type pre-mRNAs, respectively. p14 was also shown to be a subunit of the heteromeric splicing factor SF3b and to interact directly with SF3b155. Immunoprecipitations indicated that p14 is present in U12-type spliceosomes, consistent with the idea that branch point selection is similar in the major and minor spliceosomes.

Original languageEnglish (US)
Pages (from-to)4536-4546
Number of pages11
JournalEMBO Journal
Volume20
Issue number16
DOIs
StatePublished - Aug 15 2001

Fingerprint

RNA Precursors
Spliceosomes
Proteins
Complementary DNA
Immunoprecipitation
Adenosine
U2 Small Nuclear Ribonucleoproteins
Nucleophiles
Immunoblotting
Transesterification
U11-U12 small nuclear ribonucleoprotein
RNA
Antibodies

Keywords

  • Branch site
  • Pre-mRNA splicing
  • RRM
  • U11
  • U12 snRNP
  • U2 snRNP

ASJC Scopus subject areas

  • Genetics
  • Cell Biology

Cite this

Will, C. L., Schneider, C., Macmillan, A. M., Katopodis, N. F., Neubauer, G., Wilm, M., ... Query, C. C. (2001). A novel U2 and U11/U12 snRNP protein that associates with the pre-mRNA branch site. EMBO Journal, 20(16), 4536-4546. https://doi.org/10.1093/emboj/20.16.4536

A novel U2 and U11/U12 snRNP protein that associates with the pre-mRNA branch site. / Will, Cindy L.; Schneider, Claudia; Macmillan, Andrew M.; Katopodis, Nikos F.; Neubauer, Gitte; Wilm, Matthias; Lührmann, Reinhard; Query, Charles C.

In: EMBO Journal, Vol. 20, No. 16, 15.08.2001, p. 4536-4546.

Research output: Contribution to journalArticle

Will, CL, Schneider, C, Macmillan, AM, Katopodis, NF, Neubauer, G, Wilm, M, Lührmann, R & Query, CC 2001, 'A novel U2 and U11/U12 snRNP protein that associates with the pre-mRNA branch site', EMBO Journal, vol. 20, no. 16, pp. 4536-4546. https://doi.org/10.1093/emboj/20.16.4536
Will CL, Schneider C, Macmillan AM, Katopodis NF, Neubauer G, Wilm M et al. A novel U2 and U11/U12 snRNP protein that associates with the pre-mRNA branch site. EMBO Journal. 2001 Aug 15;20(16):4536-4546. https://doi.org/10.1093/emboj/20.16.4536
Will, Cindy L. ; Schneider, Claudia ; Macmillan, Andrew M. ; Katopodis, Nikos F. ; Neubauer, Gitte ; Wilm, Matthias ; Lührmann, Reinhard ; Query, Charles C. / A novel U2 and U11/U12 snRNP protein that associates with the pre-mRNA branch site. In: EMBO Journal. 2001 ; Vol. 20, No. 16. pp. 4536-4546.
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