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  Structural and Functional Characterization of a Biliverdin-Binding Near-Infrared Fluorescent Protein From the Serpin Superfamily

  Manoilov, K. Y., Ghosh, A., Almo, S. C. & Verkhusha, V. V., Jan 30 2022, In: Journal of Molecular Biology. 434, 2, 167359.

  Research output: Contribution to journal › Article › peer-review

• Structural and functional characterization of a single-chain peptide - MHC molecule that modulates both naive and activated CD8 ⁺ T cells

  Samanta, D., Mukherjee, G., Ramagopal, U. A., Chaparro, R. J., Nathenson, S. G., DiLorenzo, T. P. & Almo, S. C., Aug 16 2011, In: Proceedings of the National Academy of Sciences of the United States of America. 108, 33, p. 13682-13687 6 p.

  Research output: Contribution to journal › Article › peer-review
  16 Scopus citations

• Structural and functional characterization of glycosylation in an immunoglobulin G1 to Cryptococcus neoformans glucuronoxylomannan

  Wang, F., Nakouzi, A., Alvarez, M., Zaragoza, O., Angeletti, R. H. & Casadevall, A., Mar 2006, In: Molecular Immunology. 43, 7, p. 987-998 12 p.

  Research output: Contribution to journal › Article › peer-review
  12 Scopus citations

• Structural and Functional Characterization of Paramecium Dynein: Initial Studies

  LARSEN, JØRGEN., BARKALOW, KURT., HAMASAKI, TOSHIKAZU. & SATIR, PETER., Jan 1991, In: The Journal of protozoology. 38, 1, p. 55-61 7 p.

  Research output: Contribution to journal › Article › peer-review
  11 Scopus citations

• Structural and functional characterizations of the 5'-flanking region of the mouse glucagon receptor gene: Comparison with the rat gene

  Geiger, A., Decaux, J. F., Burcelin, R., Le Cam, A., Salazar, G., Charron, M. J., Girard, J. & Kervran, A., Jun 16 2000, In: Biochemical and Biophysical Research Communications. 272, 3, p. 912-921 10 p.

  Research output: Contribution to journal › Article › peer-review
  8 Scopus citations

• Structural and functional consequences of connexin 36 (Cx36) interaction with calmodulin

  Siu, R. C. F., Smirnova, E., Brown, C. A., Zoidl, C., Spray, D. C., Donaldson, L. W. & Zoidl, G., Nov 18 2016, In: Frontiers in Molecular Neuroscience. 9, NOV2016, 120.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  17 Scopus citations

• Structural and functional dissection of the Abp1 ADFH actin-binding domain reveals versatile in vivo adapter functions

  Quintero-Monzon, O., Rodal, A. A., Strokopytov, B., Almo, S. C. & Goode, B. L., Jul 2005, In: Molecular biology of the cell. 16, 7, p. 3128-3139 12 p.

  Research output: Contribution to journal › Article › peer-review
  26 Scopus citations

• Structural and functional investigations of the murine cavernosal nerve: A model system for serial spatio-temporal study of autonomic neuropathy

  Schaumburg, H. H., Zotova, E., Cannella, B., Raine, C. S., Arezzo, J., Tar, M. & Melman, A., Apr 2007, In: BJU International. 99, 4, p. 916-924 9 p.

  Research output: Contribution to journal › Article › peer-review
  12 Scopus citations

• Structural and functional MRI reveals multiple retinal layers

  Cheng, H., Nair, G., Walker, T. A., Kim, M. K., Pardue, M. T., Thulé, P. M., Olson, D. E. & Duong, T. Q., Nov 14 2006, In: Proceedings of the National Academy of Sciences of the United States of America. 103, 46, p. 17525-17530 6 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  139 Scopus citations

• Structural and functional organization of the human endogenous retroviral ERV9 sequences

  Lania, L., Cristofano, A. D., Strazzullo, M., Pengue, G., Majello, B. & Mantia, G. L., Nov 1992, In: Virology. 191, 1, p. 464-468 5 p.

  Research output: Contribution to journal › Article › peer-review
  31 Scopus citations

• Structural and functional properties of a single domain hemoglobin from the food-borne pathogen Campylobactor jejuni

  Lu, C., Mukai, M., Lin, Y., Wu, G., Poole, R. K. & Yeh, S. R., Aug 31 2007, In: Journal of Biological Chemistry. 282, 35, p. 25917-25928 12 p.

  Research output: Contribution to journal › Article › peer-review
  28 Scopus citations

• Structural and functional properties of a truncated hemoglobin from a food-borne pathogen Campylobacter jejuni

  Lu, C., Egawa, T., Wainwright, L. M., Poole, R. K. & Yeh, S. R., May 4 2007, In: Journal of Biological Chemistry. 282, 18, p. 13627-13636 10 p.

  Research output: Contribution to journal › Article › peer-review
  56 Scopus citations

• Structural and functional properties of hemoglobins from unicellular organisms as revealed by resonance Raman spectroscopy

  Egawa, T. & Yeh, S. R., Jan 2005, In: Journal of Inorganic Biochemistry. 99, 1, p. 72-96 25 p.

  Research output: Contribution to journal › Article › peer-review
  91 Scopus citations

• Structural and Functional Significance of Inhomogeneous Line Broadening of Band III in Hemoglobin and Fe-Mn Hybrid Hemoglobins

  Chavez, M. D., Courtney, S. H., Chance, M. R., Kiula, D., Nocek, J., Hoffman, B. M., Friedman, J. M. & Ondrias, M. R., May 1 1990, In: Biochemistry. 29, 20, p. 4844-4852 9 p.

  Research output: Contribution to journal › Article › peer-review
  49 Scopus citations

• Structural and functional studies indicating altered redox properties of hemoglobin E: Implications for production of bioactive nitric oxide

  Roche, C. J., Malashkevich, V., Balazs, T. C., Dantsker, D., Chen, Q., Moreira, J., Almo, S. C., Friedman, J. M. & Hirsch, R. E., Jul 1 2011, In: Journal of Biological Chemistry. 286, 26, p. 23452-23466 15 p.

  Research output: Contribution to journal › Article › peer-review
  20 Scopus citations

• Structural and Functional Studies on the Marburg Virus GP2 Fusion Loop

  Liu, N., Tao, Y., Brenowitz, M. D., Girvin, M. E. & Lai, J. R., Oct 1 2015, In: Journal of Infectious Diseases. 212, p. S146-S153

  Research output: Contribution to journal › Article › peer-review
  6 Scopus citations

• Structural and functional vocal fold epithelial integrity following injury

  Leydon, C., Imaizumi, M., Yang, D., Thibeault, S. L. & Fried, M. P., Dec 1 2014, In: Laryngoscope. 124, 12, p. 2764-2769 6 p.

  Research output: Contribution to journal › Article › peer-review
  11 Scopus citations

• Structural and geometrical constraints on the outer dynein arm in situ

  Barkalow, K., Avolio, J., Holwill, M. E. J., Hamasaki, T. & Satir, P., 1994, In: Cell Motility and the Cytoskeleton. 27, 4, p. 299-312 14 p.

  Research output: Contribution to journal › Article › peer-review
  8 Scopus citations

• Structural and kinetic characterization of Escherichia coli TadA, the wobble-Specific tRNA deaminase

  Kim, J., Malashkevich, V., Roday, S., Lisbin, M., Schramm, V. L. & Almo, S. C., May 23 2006, In: Biochemistry. 45, 20, p. 6407-6416 10 p.

  Research output: Contribution to journal › Article › peer-review
  45 Scopus citations

• Structural and kinetic studies of sugar binding to galactose mutarotase from Lactococcus lactis

  Thoden, J. B., Kim, J., Raushel, F. M. & Holden, H. M., Nov 22 2002, In: Journal of Biological Chemistry. 277, 47, p. 45458-45465 8 p.

  Research output: Contribution to journal › Article › peer-review
  30 Scopus citations

• Structural and mechanical repair of diffuse damage in cortical bone in vivo

  Seref-Ferlengez, Z., Jul 7 2014, In: Journal of Bone and Mineral Research. 29, 12, p. 2537-2544

  Research output: Contribution to journal › Article › peer-review

  49 Scopus citations

• Structural and mechanistic characterization of L-Histidinol phosphate phosphatase from the polymerase and Histidinol phosphatase family of proteins

  Ghodge, S. V., Fedorov, A. A., Fedorov, E. V., Hillerich, B., Seidel, R., Almo, S. C. & Raushel, F. M., Feb 12 2013, In: Biochemistry. 52, 6, p. 1101-1112 12 p.

  Research output: Contribution to journal › Article › peer-review
  22 Scopus citations

• Structural and metabolic specificity of methylthiocoformycin for malarial adenosine deaminases

  Ho, M. C., Cassera, M. B., Madrid, D. C., Ting, L-M., Tyler, P. C., Kim, K., Almo, S. C. & Schramm, V. L., 2009, In: Biochemistry. 48, 40, p. 9618-9626 9 p.

  Research output: Contribution to journal › Article › peer-review
  25 Scopus citations

• Structural and molecular mechanisms of gap junction remodeling in epicardial border zone myocytes following myocardial infarction

  Kieken, F., Mutsaers, N., Dolmatova, E., Virgil, K., Wit, A. L., Kellezi, A., Hirst-Jensen, B. J., Duffy, H. S. & Sorgen, P. L., May 8 2009, In: Circulation research. 104, 9, p. 1103-1112 10 p.

  Research output: Contribution to journal › Article › peer-review
  110 Scopus citations

• Structural and mutational studies on substrate specificity and catalysis of Salmonella typhimurium D-cysteine desulfhydrase

  Bharath, S. R., Bisht, S., Harijan, R. K., Savithri, H. S. & Murthy, M. R. N., May 4 2012, In: PloS one. 7, 5, e36267.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  9 Scopus citations

• Structural bases for heme binding and diatomic ligand recognition in truncated hemoglobins

  Milani, M., Pesce, A., Nardini, M., Ouellet, H., Ouellet, Y., Dewilde, S., Bocedi, A., Ascenzi, P., Guertin, M., Moens, L., Friedman, J. M., Wittenberg, J. B. & Bolognesi, M., Jan 2005, In: Journal of Inorganic Biochemistry. 99, 1, p. 97-109 13 p.

  Research output: Contribution to journal › Article › peer-review
  107 Scopus citations

• Structural bases of PAS domain-regulated kinase (PASK) activation in the absence of activation loop phosphorylation

  Kikani, C. K., Antonysamy, S. A., Bonanno, J. B., Romero, R., Zhang, F. F., Russell, M., Gheyi, T., Iizuka, M., Emtage, S., Sauder, J. M., Turk, B. E., Burley, S. K. & Rutter, J., Dec 24 2010, In: Journal of Biological Chemistry. 285, 52, p. 41034-41043 10 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  21 Scopus citations

• Structural basis for antibody-mediated neutralization of Lassa virus

  Hastie, K. M., Zandonatti, M. A., Kleinfelter, L. M., Heinrich, M. L., Rowland, M. M., Chandran, K., Branco, L. M., Robinson, J. E., Garry, R. F. & Saphire, E. O., Jun 2 2017, In: Science. 356, 6341, p. 923-928 6 p.

  Research output: Contribution to journal › Article › peer-review
  106 Scopus citations

• Structural basis for cancer immunotherapy by the first-in-class checkpoint inhibitor ipilimumab

  Ramagopal, U. A., Liu, W., Garrett-Thomson, S. C., Bonanno, J. B., Yan, Q., Srinivasan, M., Wong, S. C., Bell, A., Mankikar, S., Rangan, V. S., Deshpande, S., Korman, A. J. & Almo, S. C., May 23 2017, In: Proceedings of the National Academy of Sciences of the United States of America. 114, 21, p. E4223-E4232

  Research output: Contribution to journal › Article › peer-review

  Open Access
  88 Scopus citations

• Structural basis for co-stimulation by the human CTLA-4/B7-2 complex

  Schwartz, J. C. D., Zhang, X., Fedorov, A. A., Nathenson, S. G. & Almo, S. C., Mar 29 2001, In: Nature. 410, 6828, p. 604-608 5 p.

  Research output: Contribution to journal › Article › peer-review
  257 Scopus citations

• Structural Basis for differential neutralization of ebolaviruses

  Bale, S., Dias, J. M., Fusco, M. L., Hashiguchi, T., Wong, A. C., Liu, T., Keuhne, A. I., Li, S., Woods, V. L., Chandran, K., Dye, J. M. & Saphire, E. O., Apr 2012, In: Viruses. 4, 4, p. 447-470 24 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  55 Scopus citations

• Structural basis for dsRNA recognition and interferon antagonism by Ebola VP35

  Leung, D. W., Prins, K. C., Borek, D. M., Farahbakhsh, M., Tufariello, J. M., Ramanan, P., Nix, J. C., Helgeson, L. A., Otwinowski, Z., Honzatko, R. B., Basler, C. F. & Amarasinghe, G. K., Feb 2010, In: Nature Structural and Molecular Biology. 17, 2, p. 165-172 8 p.

  Research output: Contribution to journal › Article › peer-review
  146 Scopus citations

• Structural basis for hypermodification of the wobble uridine in tRNA by bifunctional enzyme MnmC

  Kim, J. & Almo, S. C., 2013, In: BMC Structural Biology. 13, 1, 5.

  Research output: Contribution to journal › Article › peer-review
  11 Scopus citations

• Structural basis for RNA polymerase III transcription repression by Maf1

  Vorländer, M. K., Baudin, F., Moir, R. D., Wetzel, R., Hagen, W. J. H., Willis, I. M. & Müller, C. W., Mar 1 2020, In: Nature Structural and Molecular Biology. 27, 3, p. 229-232 4 p.

  Research output: Contribution to journal › Article › peer-review
  18 Scopus citations

• Structural basis for substrate specificity in phosphate binding (β/α)₈-barrels: D-allulose 6-phosphate 3-epimerase from Escherichia coli K-12

  Chan, K. K., Fedorov, A. A., Fedorov, E. V., Almo, S. C. & Gerlt, J. A., Sep 9 2008, In: Biochemistry. 47, 36, p. 9608-9617 10 p.

  Research output: Contribution to journal › Article › peer-review
  11 Scopus citations

• Structural basis for suppression of hypernegative DNA supercoiling by E. coli topoisomerase I

  Tan, K., Zhou, Q., Cheng, B., Zhang, Z., Joachimiak, A. & Tse-Dinh, Y. C., Dec 2015, In: Nucleic acids research. 43, 22, p. 11031-11046 16 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  34 Scopus citations

• Structural basis for the coevolution of a viral RNA-protein complex

  Chao, J. A., Patskovsky, Y., Almo, S. C. & Singer, R. H., Jan 2008, In: Nature Structural and Molecular Biology. 15, 1, p. 103-105 3 p.

  Research output: Contribution to journal › Article › peer-review
  157 Scopus citations

• Structural basis for the divergence of substrate specificity and biological function within HAD phosphatases in lipopolysaccharide and sialic acid biosynthesis

  Daughtry, K. D., Huang, H., Malashkevich, V., Patskovsky, Y., Liu, W., Ramagopal, U., Sauder, J. M., Burley, S. K., Almo, S. C., Dunaway-Mariano, D. & Allen, K. N., Aug 13 2013, In: Biochemistry. 52, 32, p. 5372-5386 15 p.

  Research output: Contribution to journal › Article › peer-review
  16 Scopus citations

• Structural basis for the growth factor activity of human adenosine deaminase ADA2

  Zavialov, A. V., Yu, X., Spillmann, D., Lauvau, G. & Zavialo, A. V., Apr 16 2010, In: Journal of Biological Chemistry. 285, 16, p. 12367-12377 11 p.

  Research output: Contribution to journal › Article › peer-review
  72 Scopus citations

• Structural basis for the physiological temperature dependence of the association of VP16 with the cytoplasmic tail of herpes simplex virus glycoprotein H

  Kamen, D. E., Gross, S. T., Girvin, M. E. & Wilson, D. W., May 2005, In: Journal of virology. 79, 10, p. 6134-6141 8 p.

  Research output: Contribution to journal › Article › peer-review
  29 Scopus citations

• Structural basis for the recognition of C20:2-αGalCer by the invariant natural killer T cell receptor-like antibody L363

  Yu, E. D., Girardi, E., Wang, J., Mac, T. T., Yu, K. O. A., Van Calenbergh, S., Porcelli, S. A. & Zajonc, D. M., Jan 6 2012, In: Journal of Biological Chemistry. 287, 2, p. 1269-1278 10 p.

  Research output: Contribution to journal › Article › peer-review
  23 Scopus citations

• Structural basis for the specific interaction of lysine-containing proline-rich peptides with the N-terminal SH3 domain of c-Crk

  Wu, X., Knudsen, B., Feller, S. M., Zheng, J., Sali, A., Cowburn, D., Hanafusa, H. & Kuriyan, J., Feb 1995, In: Structure. 3, 2, p. 215-226 12 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  214 Scopus citations

• Structural basis for tRNA methylthiolation by the radical SAM enzyme MiaB

  Esakova, O. A., Grove, T. L., Yennawar, N. H., Arcinas, A. J., Wang, B., Krebs, C., Almo, S. C. & Booker, S. J., Sep 23 2021, In: Nature. 597, 7877, p. 566-570 5 p.

  Research output: Contribution to journal › Article › peer-review
  5 Scopus citations

• Structural basis of adhesive binding by desmocollins and desmogleins

  Harrison, O. J., Brasch, J., Lasso, G., Katsamba, P. S., Ahlsen, G., Honig, B. & Shapiro, L., Jun 28 2016, In: Proceedings of the National Academy of Sciences of the United States of America. 113, 26, p. 7160-7165 6 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  95 Scopus citations

• Structural basis of antifolate recognition and transport by PCFT

  Parker, J. L., Deme, J. C., Kuteyi, G., Wu, Z., Huo, J., Goldman, I. D., Owens, R. J., Biggin, P. C., Lea, S. M. & Newstead, S., Jul 1 2021, In: Nature. 595, 7865, p. 130-134 5 p.

  Research output: Contribution to journal › Article › peer-review
  12 Scopus citations

• Structural basis of broad ebolavirus neutralization by a human survivor antibody

  West, B. R., Wec, A. Z., Moyer, C. L., Fusco, M. L., Ilinykh, P. A., Huang, K., Wirchnianski, A. S., James, R. M., Herbert, A. S., Hui, S., Goodwin, E., Howell, K. A., Kailasan, S., Aman, M. J., Walker, L. M., Dye, J. M., Bukreyev, A., Chandran, K. & Saphire, E. O., Mar 1 2019, In: Nature Structural and Molecular Biology. 26, 3, p. 204-212 9 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  19 Scopus citations

• Structural Basis of CD160:HVEM Recognition

  Liu, W., Garrett, S. C., Fedorov, E. V., Ramagopal, U. A., Garforth, S. J., Bonanno, J. B. & Almo, S. C., Aug 6 2019, In: Structure. 27, 8, p. 1286-1295.e4

  Research output: Contribution to journal › Article › peer-review

  Open Access
  18 Scopus citations

• Structural basis of ciliary movement

  Satir, P., 1980, In: Environmental health perspectives. VOL. 35, p. 77-82 6 p.

  Research output: Contribution to journal › Article › peer-review
  24 Scopus citations

• Structural basis of differences in isoform-specific gating and lidocaine block between cardiac and skeletal muscle sodium channels

  Li, R. A., Ennis, I. L., Tomaselli, G. F. & Marbán, E., 2002, In: Molecular Pharmacology. 61, 1, p. 136-141 6 p.

  Research output: Contribution to journal › Article › peer-review
  24 Scopus citations

• Structural basis of HIV-1 capsid recognition by PF74 and CPSF6

  Bhattacharya, A., Alam, S. L., Fricke, T., Zadrozny, K., Sedzicki, J., Taylor, A. B., Demeler, B., Pornillos, O., Ganser-Pornillos, B. K., Diaz-Griffero, F., Ivanov, D. N. & Yeager, M., Dec 30 2014, In: Proceedings of the National Academy of Sciences of the United States of America. 111, 52, p. 18625-18630 6 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  150 Scopus citations