Find Research Outputs

2018
1 Citations

Anatomy of change: A Kodak moment

Melvin, W. S., Jan 1 2018, (Accepted/In press) In : Surgery (United States).

Research output: Contribution to journalArticle

Diffusion of Innovation
Anatomy
10 Citations

A naturally occurring antiviral ribonucleotide encoded by the human genome

Gizzi, A. S., Grove, T. L., Arnold, J. J., Jose, J., Jangra, R., Garforth, S. J., Du, Q., Cahill, S. M., Dulianinova, N., Love, J. D., Chandran, K., Bresnick, A. R., Cameron, C. E. & Almo, S. C., Jun 28 2018, In : Nature. 558, 7711, p. 610-614 5 p.

Research output: Contribution to journalArticle

Ribonucleotides
Cytidine Triphosphate
Human Genome
Antiviral Agents
Methionine

An Atypical Mechanism of Split Intein Molecular Recognition and Folding

Stevens, A. J., Sekar, G., Gramespacher, J. A., Cowburn, D. & Muir, T. W., Sep 19 2018, In : Journal of the American chemical society. 140, 37, p. 11791-11799 9 p.

Research output: Contribution to journalArticle

Inteins
Molecular recognition
Proteins
Protein Splicing
Blueprints
2 Citations

Ancestry-specific recent effective population size in the Americas

Browning, S. R., Browning, B. L., Daviglus, M. L., Durazo-Arvizu, R. A., Schneiderman, N., Kaplan, R. C. & Laurie, C. C., May 1 2018, In : PLoS Genetics. 14, 5, e1007385.

Research output: Contribution to journalArticle

effective population size
Population Density
ancestry
population size
Population
7 Citations

An eQTL Landscape of Kidney Tissue in Human Nephrotic Syndrome

Nephrotic Syndrome Study Network (NEPTUNE), Aug 2 2018, In : American Journal of Human Genetics. 103, 2, p. 232-244 13 p.

Research output: Contribution to journalArticle

Quantitative Trait Loci
Nephrotic Syndrome
Kidney
Transcriptome
Genome-Wide Association Study
1 Citations

Anesthetic Management of Narcolepsy Patients during Surgery: A Systematic Review

Hu, S., Singh, M., Wong, J., Auckley, D., Hershner, S., Kakkar, R., Thorpy, M. J. & Chung, F., Jan 1 2018, In : Anesthesia and Analgesia. 126, 1, p. 233-246 14 p.

Research output: Contribution to journalReview article

Narcolepsy
Anesthetics
Anesthesia
Conduction Anesthesia
Hypothalamus

A neural mass model to predict electrical stimulation evoked responses in human and non-human primate brain

Basu, I., Crocker, B., Farnes, K., Robertson, M. M., Paulk, A. C., Vallejo, D. I., Dougherty, D. D., Cash, S. S., Eskandar, E. N., Kramer, M. M. & Widge, A. S., Dec 1 2018, In : Journal of neural engineering. 15, 6, 1 p.

Research output: Contribution to journalArticle

Deep Brain Stimulation
Primates
Electric Stimulation
Brain
Movement Disorders

A new era in cytomegalovirus vaccinology: considerations for rational design of next-generation vaccines to prevent congenital cytomegalovirus infection

Nelson, C. S., Herold, B. & Permar, S. R., Dec 1 2018, In : npj Vaccines. 3, 1, 38.

Research output: Contribution to journalReview article

Cytomegalovirus Infections
Cytomegalovirus
Vaccines
Cytomegalovirus Vaccines
Herpesviridae

A new era of studying p53-mediated transcription activation

Liu, W. L., Coleman, R. A. & Singh, S. K., Mar 15 2018, In : Transcription. 9, 2, p. 102-107 6 p.

Research output: Contribution to journalReview article

Cryoelectron Microscopy
RNA Polymerase II
Transcription
Transcriptional Activation
Carcinogenesis

A New Treatment Option for Highly Sensitized Patients Awaiting Kidney Transplantation

Akalin, E., Apr 1 2018, In : American Journal of Kidney Diseases. 71, 4, p. 458-460 3 p.

Research output: Contribution to journalEditorial

Kidney Transplantation
Therapeutics
22 Citations

An improved MS2 system for accurate reporting of the mRNA life cycle

Tutucci, E., Vera Ugalde, M., Biswas, J., Garcia, J., Parker, R. & Singer, R. H., Jan 3 2018, In : Nature Methods. 15, 1, p. 81-89 9 p.

Research output: Contribution to journalArticle

Life Cycle Stages
Life cycle
Messenger RNA
Capsid Proteins
RNA Stability

An Investigation of Experiences Diagnosed as Depression in Primary Care-From the Perspective of the Diagnosed

Desai, M. U., Wertz, F. J., Davidson, L. & Karasz, A., Jul 16 2018, (Accepted/In press) In : Qualitative Psychology.

Research output: Contribution to journalArticle

Primary Health Care
Depression
Constriction
Rupture
Interviews
36 Citations

An in vivo model of functional and vascularized human brain organoids

Mansour, A. A., Goncalves, J. T., Bloyd, C. W., Li, H., Fernandes, S., Quang, D., Johnston, S., Parylak, S. L., Jin, X. & Gage, F. H., Jun 1 2018, In : Nature Biotechnology. 36, 5, p. 432-441 10 p.

Research output: Contribution to journalArticle

Organoids
Brain
Grafts
Transplants
Optogenetics

Anisocoria from Cocaine Exposure: A Case Report

Iyer, S., Tay, E. & Maslyanskaya, S., Jan 1 2018, (Accepted/In press) In : Journal of Emergency Medicine.

Research output: Contribution to journalArticle

Anisocoria
Cocaine

Ankle brachial index and cognitive function among Hispanics/Latinos: Results from the Hispanic Community Health Study/Study of Latinos

Tarraf, W., Criqui, M. H., Allison, M. A., Wright, C. B., Fornage, M., Daviglus, M., Kaplan, R. C., Davis, S., Conceicao, A. S. & González, H. M., Apr 1 2018, In : Atherosclerosis. 271, p. 61-69 9 p.

Research output: Contribution to journalArticle

Ankle Brachial Index
Hispanic Americans
Cognition
Health
Verbal Learning
1 Citations

A non-cell-autonomous role for Pml in the maintenance of leukemia from the niche

Guarnerio, J., Mendez, L. M., Asada, N., Menon, A. V., Fung, J., Berry, K., Frenette, P. S., Ito, K. & Pandolfi, P. P., Dec 1 2018, In : Nature Communications. 9, 1, 66.

Research output: Contribution to journalArticle

Emitter coupled logic circuits
leukemias
Stem cells
maintenance
Leukemia

A nonribosomal peptide synthase gene driving virulence in Mycobacterium tuberculosis

Bhatt, K., Machado, H., Osório, N. S., Sousa, J., Cardoso, F., Magalhães, C., Chen, B., Chen, M., Kim, J., Singh, A., Ferreira, C. M., Castro, A. G., Torrado, E., Jacobs, W. R., Bhatt, A. & Saraiva, M., Sep 1 2018, In : mSphere. 3, 5, e00352-18.

Research output: Contribution to journalArticle

Mycobacterium tuberculosis
Virulence
Infection
Genes
Interferon-gamma

A novel neuregulin - jagged1 paracrine loop in breast cancer transendothelial migration

Cabrera, R. M., Mao, S. P. H., Surve, C. R., Condeelis, J. S. & Segall, J. E., Apr 10 2018, In : Breast Cancer Research. 20, 1, 24.

Research output: Contribution to journalArticle

Neuregulins
Transendothelial and Transepithelial Migration
Macrophages
Breast Neoplasms
Neoplasms

Anteromedial thalamic infarct: A rare presentation

Shabbir, S. H., Nadeem, F. & Labovitz, D. L., Jan 1 2018, In : BMJ Case Reports. 2018, bcr-2017-223404.

Research output: Contribution to journalArticle

Confusion
Paresis
Eye Movements
Pathologic Constriction
Language
3 Citations

Anthracycline Use for Early Stage Breast Cancer in the Modern Era: a Review

Jasra, S. & Anampa Mesias, J. D., Jun 1 2018, In : Current Treatment Options in Oncology. 19, 6, 30.

Research output: Contribution to journalReview article

Anthracyclines
Breast Neoplasms
docetaxel
Cyclophosphamide
Triple Negative Breast Neoplasms
Anti-Bacterial Agents
Private Practice
Odds Ratio
Confidence Intervals
Surveys and Questionnaires
1 Citations

Antibody and B cell subset perturbations in human immunodeficiency virus-uninfected patients with cryptococcosis

Rohatgi, S., Nakouzi, A., Carreño, L. J., Slosar-Cheah, M., Kuniholm, M. H., Wang, T., Pappas, P. G. & Pirofski, L., Jan 1 2018, In : Open Forum Infectious Diseases. 5, 1

Research output: Contribution to journalArticle

B-Lymphocyte Subsets
Cryptococcosis
HIV
Antibodies
Cryptococcus neoformans
4 Citations

Anti-CTLA-4 therapy requires an Fc domain for efficacy

Ingram, J. R., Blomberg, O. S., Rashidian, M., Ali, L., Garforth, S. J., Fedorov, E., Fedorov, A. A., Bonanno, J. B., Le Gall, C., Crowley, S., Espinosa, C., Biary, T., Keliher, E. J., Weissleder, R., Almo, S. C., Dougan, S. K., Ploegh, H. L. & Dougan, M., Jan 1 2018, In : Proceedings of the National Academy of Sciences of the United States of America. 115, 15, p. 3912-3917 6 p.

Research output: Contribution to journalArticle

CTLA-4 Antigen
Therapeutics
Thomsen-Friedenreich antibodies
Antibodies
New World Camelids
5 Citations

Antiemetic prophylaxis as a marker of health care disparities in the national anesthesia clinical outcomes registry

Andreae, M. H., Gabry, J. S., Goodrich, B., White, R. S. & Hall, C. B., Jan 1 2018, In : Anesthesia and Analgesia. 126, 2, p. 588-599 12 p.

Research output: Contribution to journalArticle

Healthcare Disparities
Antiemetics
Registries
Anesthesia
Ondansetron
10 Citations

Anti-inflammatory therapies in myocardial infarction: Failures, hopes and challenges

Huang, S. & Frangogiannis, N. G., Jan 1 2018, (Accepted/In press) In : British Journal of Pharmacology.

Research output: Contribution to journalArticle

Infarction
Anti-Inflammatory Agents
Heart Failure
Myocardial Infarction
Chemokines
1 Citations

Antimicrobial Stewardship Training for Infectious Diseases Fellows: Program Directors Identify a Curriculum Need

Luther, V. P., Shnekendorf, R., Abbo, L. M., Advani, S., Armstrong, W. S., Barsoumian, A. E., Beeler, C. B., Bystritsky, R., Cherabuddi, K., Cohen, S., Hamilton, K. W., Ince, DI., Justo, J. A., Logan, A., Lynch, J. B., Nori, P., Ohl, C. A., Patel, P. K., Pottinger, P. S., Schwartz, B. S. & 2 othersStack, C. & Zhou, Y., Sep 28 2018, In : Clinical Infectious Diseases. 67, 8, p. 1285-1287 3 p.

Research output: Contribution to journalArticle

Curriculum
Communicable Diseases
Needs Assessment
Education
Surveys and Questionnaires

An Unsupervised Compressed Sensing Algorithm for Multi-Channel Neural Recording and Spike Sorting

Xiong, T., Zhang, J., Martinez-Rubio, C., Thakur, C. S., Eskandar, E. N., Chin, S. P., Etienne-Cummings, R. & Tran, T. D., Apr 26 2018, (Accepted/In press) In : IEEE Transactions on Neural Systems and Rehabilitation Engineering.

Research output: Contribution to journalArticle

Compressed sensing
Sorting
Learning
Glossaries
Group Structure

An unusual cause of community-acquired pneumonia

Mittal, J., Szymczak, W. A., Robbins, N., Harris, C. & Nori, P., Jan 1 2018, In : IDCases. 11, p. 41-43 3 p.

Research output: Contribution to journalArticle

Tropical Climate
Acinetobacter baumannii
New England
Pneumonia
Morbidity
6 Citations

An update on the pathogenesis of cholesterol gallstone disease

Di Ciaula, A., Wang, D. Q. H. & Portincasa, P., Mar 1 2018, In : Current Opinion in Gastroenterology. 34, 2, p. 71-80 10 p.

Research output: Contribution to journalReview article

Gallstones
Cholesterol
Gallbladder
Gastrointestinal Motility
Intestinal Absorption
10 Citations

A permanent window for the murine lung enables high-resolution imaging of cancer metastasis

Entenberg, D. R., Voiculescu, S., Guo, P., Borriello, L., Wang, Y., Karagiannis, G. S., Jones, J., Baccay, F. B., Oktay, M. H. & Condeelis, J. S., Jan 3 2018, In : Nature Methods. 15, 1, p. 73-80 8 p.

Research output: Contribution to journalArticle

Vacuum
Neoplasm Metastasis
Imaging techniques
Tumors
Lung
4 Citations

A phase ii study of pelareorep (REOLYSIN®) in combination with gemcitabine for patients with advanced pancreatic adenocarcinoma

Mahalingam, D., Goel, S., Aparo, S., Arora, S. P., Noronha, N., Tran, H., Chakrabarty, R., Selvaggi, G., Gutierrez, A., Coffey, M., Nawrocki, S. T., Nuovo, G. & Mita, M. M., Jun 1 2018, In : Cancers. 10, 6, 160.

Research output: Contribution to journalArticle

gemcitabine
Adenocarcinoma
Oncolytic Virotherapy
Mammalian orthoreovirus 3
Survival Rate
17 Citations

Apixaban in patients at risk of stroke undergoing atrial fibrillation ablation

Kirchhof, P., Haeusler, K. G., Blank, B., De Bono, J., Callans, D., Elvan, A., Fetsch, T., Van Gelder, I. C., Gentlesk, P., Grimaldi, M., Hansen, J., Hindricks, G., Al-Khalidi, H. R., Massaro, T., Mont, L., Nielsen, J. C., Nölker, G., Piccini, J. P., De Potter, T., Scherr, D. & 5 othersSchotten, U., Themistoclakis, S., Todd, D., Vijgen, J. & Di Biase, L., Aug 1 2018, In : European Heart Journal. 39, 32, p. 2942-2955 14 p.

Research output: Contribution to journalArticle

Atrial Fibrillation
Stroke
Cognition
Brain
Hemorrhage

Apolipoprotein E genotypes among diverse middle-aged and older Latinos: Study of Latinos-Investigation of Neurocognitive Aging results (HCHS/SOL)

González, H. M., Tarraf, W., Jian, X., Vásquez, P. M., Kaplan, R. C., Thyagarajan, B., Daviglus, M., Lamar, M., Gallo, L. C., Zeng, D. & Fornage, M., Dec 1 2018, In : Scientific reports. 8, 1, 17578.

Research output: Contribution to journalArticle

Apolipoproteins E
Hispanic Americans
Genotype
Apolipoprotein E4
Alzheimer Disease

A potential link between p53, cell competition and ribosomopathy in mammals and in Drosophila

Baker, N. E., Kiparaki, M. & Khan, C., Jan 1 2018, (Accepted/In press) In : Developmental Biology.

Research output: Contribution to journalArticle

Drosophila
Mammals
Ribosomal Proteins
Diamond-Blackfan Anemia
Drosophila Proteins
1 Citations

Applicability and accuracy of pretest probability calculations implemented in the NICE clinical guideline for decision making about imaging in patients with chest pain of recent onset

Roehle, R., Wieske, V., Schuetz, G. M., Gueret, P., Andreini, D., Meijboom, W. B., Pontone, G., Garcia, M. J., Alkadhi, H., Honoris, L., Hausleiter, J., Bettencourt, N., Zimmermann, E., Leschka, S., Gerber, B., Rochitte, C., Schoepf, U. J., Shabestari, A. A., Nørgaard, B., Sato, A. & 46 othersKnuuti, J., Meijs, M. F. L., Brodoefel, H., Jenkins, S. M. M., Øvrehus, K. A., Diederichsen, A. C. P., Hamdan, A., Halvorsen, B. A., Mendoza Rodriguez, V., Wan, Y. L., Rixe, J., Sheikh, M., Langer, C., Ghostine, S., Martuscelli, E., Niinuma, H., Scholte, A., Nikolaou, K., Ulimoen, G., Zhang, Z., Mickley, H., Nieman, K., Kaufmann, P., Büchel, R. R., Herzog, B., Clouse, M., Halon, D. A., Leipsic, J., Bush, D., Jakamy, R., Sun, K., Yang, L., Johnson, T., Laissy, J. P., Marcus, R., Muraglia, S., Tardif, J. C., Chow, B., Paul, N., Maintz, D., Hoe, J., de Roos, A., Haase, R., Laule, M., Schlattmann, P. & Dewey, M., Mar 19 2018, (Accepted/In press) In : European Radiology. p. 1-12 12 p.

Research output: Contribution to journalArticle

Chest Pain
Guidelines
Meta-Analysis
Clinical Decision-Making
Decision Making

Applications of 3-Dimensional ultrasonography in the neck, excluding the Thyroid

Frank, S. J., Koenigsberg, T. C., Gutman, D. & Koenigsberg, M., Jan 1 2018, In : Journal of Ultrasound in Medicine. 37, 7, p. 1791-1806 16 p.

Research output: Contribution to journalArticle

Ultrasonography
Thyroid Gland
Neck
Parathyroid Glands
Submandibular Gland
1 Citations

Applying participatory action research in traumatic brain injury studies to prevent post-traumatic epilepsy

For the EpiBioS4Rx Public Engagement Core, Jan 1 2018, (Accepted/In press) In : Neurobiology of Disease.

Research output: Contribution to journalArticle

Post-Traumatic Epilepsy
Health Services Research
Biomedical Research
Consumer Organizations
Research Design
5 Citations

Approaches to Evaluate Lung Inflammation in Translational Research

Meyerholz, D. K., Sieren, J. C., Beck, A. P. & Flaherty, H. A., Jan 1 2018, In : Veterinary Pathology. 55, 1, p. 42-52 11 p.

Research output: Contribution to journalReview article

Translational Medical Research
Pneumonia
inflammation
lungs
Lung Diseases

A procedure to increase the power of Granger-causal analysis through temporal smoothing

Spencer, E., Martinet, L. E., Eskandar, E. N., Chu, C. J., Kolaczyk, E. D., Cash, S. S., Eden, U. T. & Kramer, M. A., Oct 1 2018, In : Journal of Neuroscience Methods. 308, p. 48-61 14 p.

Research output: Contribution to journalArticle

History
Brain
Causality
Statistical Models
Power (Psychology)
Endometrial Ablation Techniques
Multicenter Studies
Menorrhagia
Safety
Hemorrhage

A Prospective Assessment of Optimal Mechanical Ventilation Parameters for Pediatric Catheter Ablation

Janson, C. M., Ceresnak, S. R., Choi, J., Dubin, A. M., Motonaga, K. S., Mann, G. E., Kahana, M., Fitz-James, I. A., Wise-Faberowski, L., Kamra, K., Nappo, L., Trela, A. & Pass, R. H., Jan 1 2018, (Accepted/In press) In : Pediatric cardiology.

Research output: Contribution to journalArticle

Catheter Ablation
Tidal Volume
Artificial Respiration
Positive-Pressure Respiration
Ventilation

A prospective study of soluble receptor for advanced glycation end products and adipokines in association with pancreatic cancer in postmenopausal women

White, D. L., Hoogeveen, R. C., Chen, L., Richardson, P., Ravishankar, M., Shah, P., Tinker, L., Rohan, T. E., Whitsel, E. A., El-Serag, H. B. & Jiao, L., Jan 1 2018, (Accepted/In press) In : Cancer Medicine.

Research output: Contribution to journalArticle

Adipokines
Pancreatic Neoplasms
Chemokine CCL2
Prospective Studies
Biomarkers
1 Citations
Metoclopramide
Emergency Treatment
Nerve Block
Bupivacaine
Migraine Disorders
3 Citations

A randomized controlled pilot study on mindfulness-based cognitive therapy for unipolar depression in patients with chronic pain

De Jong, M., Peeters, F., Gard, T., Ashih, H., Doorley, J., Walker, R., Rhoades, L., Kulich, R. J., Kueppenbender, K. D., Alpert, J. E., Hoge, E. A., Britton, W. B., Lazar, S. W., Fava, M. & Mischoulon, D., Jan 1 2018, In : Journal of Clinical Psychiatry. 79, 1, p. 26-34 9 p.

Research output: Contribution to journalArticle

Mindfulness
Cognitive Therapy
Depressive Disorder
Chronic Pain
Depression
5 Citations

A Randomized Dose-Ranging Study of Neuropeptide y in Patients with Posttraumatic Stress Disorder

Sayed, S., Van Dam, N. T., Horn, S. R., Kautz, M. M., Parides, M. K., Costi, S., Collins, K. A., Iacoviello, B., Iosifescu, D. V., Mathé, A. A., Southwick, S. M., Feder, A., Charney, D. S. & Murrough, J. W., Jan 1 2018, In : International Journal of Neuropsychopharmacology. 21, 1, p. 3-11 9 p.

Research output: Contribution to journalArticle

Neuropeptide Y
Post-Traumatic Stress Disorders
Neuropeptides
Anxiety
Equipment and Supplies

A Randomized Pilot Trial of a Novel Behavioral Intervention for Chronic Pain Tailored to Individuals with HIV

Merlin, J. S., Westfall, A. O., Long, D., Davies, S., Saag, M., Demonte, W., Young, S., Kerns, R. D., Bair, M. J., Kertesz, S., Turan, J. M., Kilgore, M., Clay, O. J., Starrels, J. L., Pekmezi, D. & Johnson, M. O., Jan 16 2018, (Accepted/In press) In : AIDS and Behavior. p. 1-10 10 p.

Research output: Contribution to journalArticle

Chronic Pain
HIV
Pain
Pain Management
Self Care

A randomized trial comparing surgeon-administered intraoperative transversus abdominis plane block with anesthesiologist-administered transcutaneous block

Narasimhulu, D. M., Scharfman, L., Minkoff, H., George, B., Homel, P. & Tyagaraj, K., Jan 1 2018, (Accepted/In press) In : International Journal of Obstetric Anesthesia.

Research output: Contribution to journalArticle

Abdominal Muscles
Postoperative Pain
Analgesia
Morphine
Opioid Analgesics
Migraine Disorders
Dexamethasone
Headache
Hospital Emergency Service
Adrenal Cortex Hormones

A randomized trial of three novel regimens for recurrent acute myeloid leukemia demonstrates the continuing challenge of treating this difficult disease

Litzow, M. R., Wang, X. V., Carroll, M. P., Karp, J. E., Ketterling, R. P., Zhang, Y., Kaufmann, S. H., Lazarus, H. M., Luger, S. M., Paietta, E. M., Pratz, K. W., Tun, H. W., Altman, J. K., Broun, E. R., Rybka, W. B., Rowe, J. M. & Tallman, M. S., Jan 1 2018, (Accepted/In press) In : American Journal of Hematology.

Research output: Contribution to journalArticle

alvocidib
Mitoxantrone
Cytarabine
Acute Myeloid Leukemia
Topotecan

A recurrent novel MGA-NUTM1 fusion identifies a new subtype of high-grade spindle cell sarcoma

Diolaiti, D., Dela Cruz, F. S., Gundem, G., Bouvier, N., Boulad, M., Zhang, Y., Chou, A. J-H., Dunkel, I. J., Sanghvi, R., Shah, M., Geiger, H., Rahman, S., Felice, V., Wrzeszczynski, K. O., Darnell, R. B., Antonescu, C. R., French, C. A., Papaemmanuil, E., Kung, A. L. & Shukla, N., Dec 1 2018, In : Cold Spring Harbor molecular case studies. 4, 6

Research output: Contribution to journalArticle

Gene Fusion
Sarcoma
Carcinoma
Exons
Neoplasms