• 417 Citations
  • 12 h-Index
20132018

Research output per year

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Publications

  • 417 Citations
  • 12 h-Index
  • 20 Article
  • 1 Conference contribution
  • 1 Comment/debate
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Article
2013

Chemical map of Schizosaccharomyces pombe reveals species-specific features in nucleosome positioning

Moyle-Heyrman, G., Zaichuk, T., Xi, L., Zhang, Q., Uhlenbeck, O. C., Holmgren, R., Widom, J. & Wang, J. P., Dec 10 2013, In : Proceedings of the National Academy of Sciences of the United States of America. 110, 50, p. 20158-20163 6 p.

Research output: Contribution to journalArticle

56 Scopus citations

High-resolution nucleosome mapping of targeted regions using BAC-based enrichment

Yigit, E., Zhang, Q., Xi, L., Grilley, D., Widom, J., Wang, J. P., Rao, A. & Pipkin, M. E., Apr 1 2013, In : Nucleic acids research. 41, 7, p. e87

Research output: Contribution to journalArticle

14 Scopus citations

Naked mole-rat has increased translational fidelity compared with the mouse, as well as a unique 28S ribosomal RNA cleavage

Azpurua, J., Ke, Z., Chen, I. X., Zhang, Q., Ermolenko, D. N., Zhang, Z. D., Gorbunova, V. & Seluanov, A., Oct 22 2013, In : Proceedings of the National Academy of Sciences of the United States of America. 110, 43, p. 17350-17355 6 p.

Research output: Contribution to journalArticle

75 Scopus citations

Nucleosome mapping across the CFTR locus identifies novel regulatory factors

Yigit, E., Bischof, J. M., Zhang, Z., Ott, C. J., Kerschner, J. L., Leir, S. H., Buitrago-Delgado, E., Zhang, Q., Wang, J. P. Z., Widom, J. & Harris, A., Mar 2013, In : Nucleic acids research. 41, 5, p. 2857-2868 12 p.

Research output: Contribution to journalArticle

14 Scopus citations

SubNet: A Java application for subnetwork extraction

Zhang, Q. & Zhang, Z. D., Jan 1 2013, In : Bioinformatics. 29, 19, p. 2509-2511 3 p.

Research output: Contribution to journalArticle

12 Scopus citations
2014

High-density nucleosome occupancy map of human chromosome 9p21-22 reveals chromatin organization of the type I interferon gene cluster

Freaney, J. E., Zhang, Q., Yigit, E., Kim, R., Widom, J., Wang, J. P. & Horvath, C. M., Sep 1 2014, In : Journal of Interferon and Cytokine Research. 34, 9, p. 676-685 10 p.

Research output: Contribution to journalArticle

7 Scopus citations

Histone Methyltransferase MMSET/NSD2 Alters EZH2 Binding and Reprograms the Myeloma Epigenome through Global and Focal Changes in H3K36 and H3K27 Methylation

Popovic, R., Martinez-Garcia, E., Giannopoulou, E. G., Zhang, Q., Zhang, Q., Ezponda, T., Shah, M. Y., Zheng, Y., Will, C. M., Small, E. C., Hua, Y., Bulic, M., Jiang, Y., Carrara, M., Calogero, R. A., Kath, W. L., Kelleher, N. L., Wang, J. P., Elemento, O. & Licht, J. D., Sep 1 2014, In : PLoS genetics. 10, 9

Research output: Contribution to journalArticle

87 Scopus citations
2015

Comparative analysis of genome maintenance genes in naked mole rat, mouse, and human

Macrae, S. L., Zhang, Q., Lemetre, C., Seim, I., Calder, R. B., Hoeijmakers, J., Suh, Y., Gladyshev, V. N., Seluanov, A., Gorbunova, V., Vijg, J. & Zhang, Z. D., Apr 1 2015, In : Aging cell. 14, 2, p. 288-291 4 p.

Research output: Contribution to journalArticle

30 Scopus citations

Differential nucleosome occupancies across Oct4-Sox2 binding sites in murine embryonic stem cells

Sebeson, A., Xi, L., Zhang, Q., Sigmund, A., Wang, J. P., Widom, J. & Wang, X., May 18 2015, In : PloS one. 10, 5, e0127214.

Research output: Contribution to journalArticle

5 Scopus citations
2016

Cell culture-based profiling across mammals reveals DNA repair and metabolism as determinants of species longevity

Ma, S., Upneja, A., Galecki, A., Tsai, Y. M., Burant, C. F., Raskind, S., Zhang, Q., Zhang, Z. D., Seluanov, A., Gorbunova, V., Clish, C. B., Miller, R. A. & Gladyshev, V. N., Nov 22 2016, In : eLife. 5, NOVEMBER2016, e19130.

Research output: Contribution to journalArticle

26 Scopus citations

Integrated post-GWAS analysis sheds new light on the disease mechanisms of schizophrenia

Lin, J. R., Cai, Y., Zhang, Q., Zhang, W., Nogales-Cadenas, R. & Zhang, Z. D., Dec 2016, In : Genetics. 204, 4, p. 1587-1600 14 p.

Research output: Contribution to journalArticle

18 Scopus citations

MicroRNA expression and gene regulation drive breast cancer progression and metastasis in PyMT mice

Nogales-Cadenas, R., Cai, Y., Lin, J. R., Zhang, Q., Zhang, W., Montagna, C. & Zhang, Z. D., Jul 22 2016, In : Breast Cancer Research. 18, 1, 75.

Research output: Contribution to journalArticle

12 Scopus citations

Systems-level analysis of human aging genes shed new light on mechanisms of aging

Zhang, Q., Nogales-Cadenas, R., Lin, J. R., Zhang, W., Cai, Y., Vijg, J. & Zhang, Z. D., 2016, In : Human molecular genetics. 25, 14, p. 2934-2947 14 p.

Research output: Contribution to journalArticle

17 Scopus citations
2017

Cyclin C regulates adipogenesis by stimulating transcriptional activity of CCAAT/enhancer-binding protein α

Song, Z., Xiaoli, A. M., Zhang, Q., Zhang, Y., Yang, E. S. T., Wang, S. E., Chang, R., Zhang, Z. D., Yang, G., Strich, R., Pessin, J. E. & Yang, F., May 26 2017, In : Journal of Biological Chemistry. 292, 21, p. 8918-8932 15 p.

Research output: Contribution to journalArticle

3 Scopus citations
4 Scopus citations

Network analysis of mitonuclear GWAS reveals functional networks and tissue expression profiles of disease-associated genes

Johnson, S. C., Gonzalez, B., Zhang, Q., Milholland, B., Zhang, Z. & Suh, Y., Jan 1 2017, In : Human Genetics. 136, 1, p. 55-65 11 p.

Research output: Contribution to journalArticle

6 Scopus citations

Transcriptomic dynamics of breast cancer progression in the MMTV-PyMT mouse model

Cai, Y., Nogales-Cadenas, R., Zhang, Q., Lin, J. R., Zhang, W., O'Brien, K., Montagna, C. & Zhang, Z. D., Feb 17 2017, In : BMC Genomics. 18, 1, 185.

Research output: Contribution to journalArticle

12 Scopus citations
2018

Epigenetic alterations to Polycomb targets precede malignant transition in a mouse model of breast cancer

Cai, Y., Lin, J. R., Zhang, Q., O'Brien, K., Montagna, C. & Zhang, Z. D., Dec 1 2018, In : Scientific reports. 8, 1, 5535.

Research output: Contribution to journalArticle

3 Scopus citations

HEDD: Human Enhancer Disease Database

Wang, Z., Zhang, Q., Zhang, W., Lin, J. R., Cai, Y., Mitra, J. & Zhang, Z. D., Jan 1 2018, In : Nucleic acids research. 46, D1, p. D113-D120

Research output: Contribution to journalArticle

12 Scopus citations

PGA: Post-GWAS analysis for disease gene identification

Lin, J. R., Jaroslawicz, D., Cai, Y., Zhang, Q., Wang, Z. & Zhang, Z. D., May 15 2018, In : Bioinformatics. 34, 10, p. 1786-1788 3 p.

Research output: Contribution to journalArticle

2 Scopus citations