Anatomy & Structural Biology

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Review article
2020

The Contribution of Race to Breast Tumor Microenvironment Composition and Disease Progression

Kim, G., Pastoriza, J. M., Condeelis, J. S., Sparano, J. A., Filippou, P. S., Karagiannis, G. S. & Oktay, M. H., Jun 30 2020, In : Frontiers in Oncology. 10, 1022.

Research output: Contribution to journalReview article

Open Access
1 Scopus citations
2019

Chemotherapy-induced metastasis: Molecular mechanisms, clinical manifestations, therapeutic interventions

Karagiannis, G. S., Condeelis, J. S. & Oktay, M. H., Sep 15 2019, In : Cancer Research. 79, 18, p. 4567-4577 11 p.

Research output: Contribution to journalReview article

8 Scopus citations
Open Access
1 Scopus citations

Near-Infrared Fluorescent Proteins and Their Applications

Karasev, M. M., Stepanenko, O. V., Rumyantsev, K. A., Turoverov, K. K. & Verkhusha, V. V., Jan 1 2019, In : Biochemistry (Moscow). 84, p. 32-50 19 p.

Research output: Contribution to journalReview article

8 Scopus citations

The conserved ancestral signaling pathway from cilium to nucleus

Satir, P. & Satir, B. H., Aug 2 2019, In : Journal of cell science. 132, 15

Research output: Contribution to journalReview article

Open Access
4 Scopus citations

The emerging roles of macrophages in cancer metastasis and response to chemotherapy

Sanchez, L. R., Borriello, L., Entenberg, D., Condeelis, J. S., Oktay, M. H. & Karagiannis, G. S., Aug 2019, In : Journal of Leukocyte Biology. 106, 2, p. 259-274 16 p.

Research output: Contribution to journalReview article

18 Scopus citations

The travels of mRNAs in neurons: do they know where they are going?

Das, S., Singer, R. H. & Yoon, Y. J., Aug 2019, In : Current Opinion in Neurobiology. 57, p. 110-116 7 p.

Research output: Contribution to journalReview article

8 Scopus citations
2018

A new era of studying p53-mediated transcription activation

Liu, W. L., Coleman, R. A. & Singh, S. K., Mar 15 2018, In : Transcription. 9, 2, p. 102-107 6 p.

Research output: Contribution to journalReview article

C. elegans—an emerging model to study metal-induced rage-related pathologies

Pinkas, A., Martins, A. C. & Aschner, M., Jul 4 2018, In : International journal of environmental research and public health. 15, 7, 1407.

Research output: Contribution to journalReview article

2 Scopus citations

Imaging mRNA in Vivo, from Birth to Death

Tutucci, E., Livingston, N. M., Singer, R. H. & Wu, B., May 20 2018, In : Annual Review of Biophysics. 47, p. 85-106 22 p.

Research output: Contribution to journalReview article

40 Scopus citations

Near-Infrared Fluorescent Proteins: Multiplexing and Optogenetics across Scales

Shcherbakova, D. M., Stepanenko, O. V., Turoverov, K. K. & Verkhusha, V. V., Dec 2018, In : Trends in Biotechnology. 36, 12, p. 1230-1243 14 p.

Research output: Contribution to journalReview article

20 Scopus citations

Optogenetically controlled protein kinases for regulation of cellular signaling

Leopold, A. V., Chernov, K. G. & Verkhusha, V. V., Apr 7 2018, In : Chemical Society Reviews. 47, 7, p. 2454-2484 31 p.

Research output: Contribution to journalReview article

18 Scopus citations

The Different Routes to Metastasis via Hypoxia-Regulated Programs

Nobre, A. R., Entenberg, D., Wang, Y., Condeelis, J. & Aguirre-Ghiso, J. A., Nov 2018, In : Trends in Cell Biology. 28, 11, p. 941-956 16 p.

Research output: Contribution to journalReview article

26 Scopus citations
2017

Bacterial phytochromes, cyanobacteriochromes and allophycocyanins as a source of near-infrared fluorescent probes

Oliinyk, O. S., Chernov, K. G. & Verkhusha, V. V., Aug 3 2017, In : International Journal of Molecular Sciences. 18, 8, 1691.

Research output: Contribution to journalReview article

18 Scopus citations

CILIA: Before and after

Satir, P., Mar 8 2017, In : Cilia. 6, 1, 1.

Research output: Contribution to journalReview article

31 Scopus citations

Near-Infrared Fluorescent Proteins, Biosensors, and Optogenetic Tools Engineered from Phytochromes

Chernov, K. G., Redchuk, T. A., Omelina, E. S. & Verkhusha, V., May 10 2017, In : Chemical Reviews. 117, 9, p. 6423-6446 24 p.

Research output: Contribution to journalReview article

98 Scopus citations

Neurotoxic effect of active ingredients in sunscreen products, a contemporary review

Ruszkiewicz, J. A., Pinkas, A., Ferrer, B., Peres, T. V., Tsatsakis, A. & Aschner, M., Jan 1 2017, In : Toxicology Reports. 4, p. 245-259 15 p.

Research output: Contribution to journalReview article

52 Scopus citations

Neurotoxicity of fragrance compounds: A review

Pinkas, A., Gonçalves, C. L. & Aschner, M., Jan 1 2017, In : Environmental Research. 158, p. 342-349 8 p.

Research output: Contribution to journalReview article

8 Scopus citations

RNP transport in cell biology: the long and winding road

Eliscovich, C. & Singer, R. H., Apr 1 2017, In : Current Opinion in Cell Biology. 45, p. 38-46 9 p.

Research output: Contribution to journalReview article

28 Scopus citations
2016

DNMT3A and TET2 in the pre-leukemic phase of hematopoietic disorders

Sato, H., Wheat, J. C., Steidl, U. G. & Ito, K., Aug 22 2016, In : Frontiers in Oncology. 6, AUG, 187.

Research output: Contribution to journalReview article

19 Scopus citations

Exosomes and nanotubes: Control of immune cell communication

McCoy-Simandle, K., Hanna, S. J. & Cox, D., Feb 2016, In : International Journal of Biochemistry and Cell Biology. 71, p. 44-54 11 p.

Research output: Contribution to journalReview article

48 Scopus citations

Is genicular nerve radiofrequency ablation safe? A literature review and anatomical study

Kim, S. Y., Le, P. U., Kosharskyy, B., Kaye, A. D., Shaparin, N. & Downie, S. A., 2016, In : Pain Physician. 19, 5, p. E697-E705

Research output: Contribution to journalReview article

29 Scopus citations

Single-Cell and Single-Molecule Analysis of Gene Expression Regulation

Vera Ugalde, M., Biswas, J., Senecal, A., Singer, R. H. & Park, H. Y., Nov 23 2016, In : Annual Review of Genetics. 50, p. 267-291 25 p.

Research output: Contribution to journalReview article

48 Scopus citations

Tumor cell intravasation

Chiang, S. P. H., Cabrera, R. M. & Segall, J. E., Jul 1 2016, In : American Journal of Physiology - Cell Physiology. 311, 1, p. C1-C14

Research output: Contribution to journalReview article

82 Scopus citations
2015

In the right place at the right time: Visualizing and understanding mRNA localization

Buxbaum, A. R., Haimovich, G. & Singer, R. H., Jan 15 2015, In : Nature Reviews Molecular Cell Biology. 16, 2, p. 95-109 15 p.

Research output: Contribution to journalReview article

244 Scopus citations

Mechanisms of invasion in head and neck cancer

Jimenez, L., Jayakar, S. K., Ow, T. J. & Segall, J. E., Nov 2015, In : Archives of Pathology and Laboratory Medicine. 139, 11, p. 1334-1348 15 p.

Research output: Contribution to journalReview article

31 Scopus citations

Natural photoreceptors as a source of fluorescent proteins, biosensors, and optogenetic tools

Shcherbakova, D. M., Shemetov, A. A., Kaberniuk, A. A. & Verkhusha, V. V., Jun 2 2015, In : Annual review of biochemistry. 84, p. 519-550 32 p.

Research output: Contribution to journalReview article

98 Scopus citations
69 Scopus citations

Single-molecule insights into mRNA dynamics in neurons

Buxbaum, A. R., Yoon, Y. J., Singer, R. H. & Park, H. Y., Aug 1 2015, In : Trends in Cell Biology. 25, 8, p. 468-475 8 p.

Research output: Contribution to journalReview article

46 Scopus citations
2014

A structural basis for how motile cilia beat

Satir, P., Heuser, T. & Sale, W. S., Nov 25 2014, In : BioScience. 64, 12, p. 1073-1083 11 p.

Research output: Contribution to journalReview article

30 Scopus citations

Bioengineering paradigms for cell migration in confined microenvironments

Stroka, K. M., Gu, Z., Sun, S. X. & Konstantopoulos, K., Oct 2014, In : Current Opinion in Cell Biology. 30, 1, p. 41-50 10 p.

Research output: Contribution to journalReview article

26 Scopus citations

Chromophore chemistry of fluorescent proteins controlled by light

Shcherbakova, D. M. & Verkhusha, V. V., Jun 2014, In : Current Opinion in Chemical Biology. 20, 1, p. 60-68 9 p.

Research output: Contribution to journalReview article

35 Scopus citations

Onward from the cradle

Satir, P., Nov 1 2014, In : Molecular biology of the cell. 25, 21, p. 3277-3279 3 p.

Research output: Contribution to journalReview article

Rho GTPase isoforms in cell motility: Don't fret, we have FRET

Donnelly, S. K., Bravo-Cordero, J. J. & Hodgson, L., Nov 1 2014, In : Cell Adhesion and Migration. 8, 6, p. 526-534 9 p.

Research output: Contribution to journalReview article

21 Scopus citations

RNA-guided isomerization of uridine to pseudouridine - Pseudouridylation

Yu, Y. T. & Meier, U. T., Dec 1 2014, In : RNA biology. 11, 12, p. 1483-1494 12 p.

Research output: Contribution to journalReview article

47 Scopus citations
2013

Eukaryotic transcriptional dynamics: From single molecules to cell populations

Coulon, A., Chow, C. C., Singer, R. H. & Larson, D. R., Aug 2013, In : Nature Reviews Genetics. 14, 8, p. 572-584 13 p.

Research output: Contribution to journalReview article

160 Scopus citations

Fluorescent proteins in cellular organelles: Serious pitfalls and some solutions

Costantini, L. M. & Snapp, E. L., Nov 1 2013, In : DNA and Cell Biology. 32, 11, p. 622-627 6 p.

Research output: Contribution to journalReview article

27 Scopus citations

Functions of cofilin in cell locomotion and invasion

Bravo-Cordero, J. J., Magalhaes, M. A. O., Eddy, R. J., Hodgson, L. & Condeelis, J., Jul 1 2013, In : Nature Reviews Molecular Cell Biology. 14, 7, p. 405-417 13 p.

Research output: Contribution to journalReview article

257 Scopus citations

Review: Molecular mechanism of microglia stimulated glioblastoma invasion

Coniglio, S. J. & Segall, J. E., Oct 1 2013, In : Matrix Biology. 32, 7-8, p. 372-380 9 p.

Research output: Contribution to journalReview article

59 Scopus citations

The fate of the messenger is pre-determined: A new model for regulation of gene expression

Haimovich, G., Choder, M., Singer, R. H. & Trcek, T., Jun 2013, In : Biochimica et Biophysica Acta - Gene Regulatory Mechanisms. 1829, 6-7, p. 643-653 11 p.

Research output: Contribution to journalReview article

59 Scopus citations
2012

Chromophore transformations in red fluorescent proteins

Subach, F. V. & Verkhusha, V. V., Jul 11 2012, In : Chemical Reviews. 112, 7, p. 4308-4327 20 p.

Research output: Contribution to journalReview article

104 Scopus citations

Classifying collective cancer cell invasion

Friedl, P., Locker, J., Sahai, E. & Segall, J. E., Aug 1 2012, In : Nature Cell Biology. 14, 8, p. 777-783 7 p.

Research output: Contribution to journalReview article

459 Scopus citations

Correlated Immunohistochemical and Cytological Assays for the Prediction of Hematogenous Dissemination of Breast Cancer

Oktay, M. H., Gertler, F. B., Liu, Y. F., Rohan, T. E., Condeelis, J. S. & Jones, J. G., Mar 1 2012, In : Journal of Histochemistry and Cytochemistry. 60, 3, p. 168-173 6 p.

Research output: Contribution to journalReview article

11 Scopus citations

Directed cell invasion and migration during metastasis

Bravo-Cordero, J. J., Hodgson, L. & Condeelis, J., Apr 1 2012, In : Current Opinion in Cell Biology. 24, 2, p. 277-283 7 p.

Research output: Contribution to journalReview article

250 Scopus citations

Flow cytometry of fluorescent proteins

Telford, W. G., Hawley, T., Subach, F., Verkhusha, V. & Hawley, R. G., Jul 1 2012, In : Methods. 57, 3, p. 318-330 13 p.

Research output: Contribution to journalReview article

45 Scopus citations

Implications of protein structure instability: From physiological to pathological secondary structure

Sukhanova, A., Poly, S., Shemetov, A., Bronstein, I. & Nabiev, I., Aug 2012, In : Biopolymers. 97, 8, p. 577-588 12 p.

Research output: Contribution to journalReview article

10 Scopus citations

Molecular interaction of proteins and peptides with nanoparticles

Shemetov, A. A., Nabiev, I. & Sukhanova, A., Jun 26 2012, In : ACS Nano. 6, 6, p. 4585-4602 18 p.

Research output: Contribution to journalReview article

267 Scopus citations

Multiscale dynamics in nucleocytoplasmic transport

Grünwald, D. & Singer, R. H., Feb 1 2012, In : Current Opinion in Cell Biology. 24, 1, p. 100-106 7 p.

Research output: Contribution to journalReview article

20 Scopus citations

Primary cilia and coordination of receptor tyrosine kinase (RTK) signalling

Christensen, S. T., Clement, C. A., Satir, P. & Pedersen, L. B., Jan 1 2012, In : Journal of Pathology. 226, 2, p. 172-184 13 p.

Research output: Contribution to journalReview article

100 Scopus citations

Red fluorescent proteins: Advanced imaging applications and future design

Shcherbakova, D. M., Subach, O. M. & Verkhusha, V. V., Oct 22 2012, In : Angewandte Chemie - International Edition. 51, 43, p. 10724-10738 15 p.

Research output: Contribution to journalReview article

99 Scopus citations